Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851459.1_cds_XP_016511510.1_24246
CDS Infomation

[gene=LOC107828664] [db_xref=GeneID:107828664] [protein=mRNA-binding protein PUF3-like] [protein_id=XP_016511510.1] [location=join(51301..52589,52692..52854,53923..54086,55132..55387,56134..56241)] [gbkey=CDS]
Sequence

ATGTATAGAGGTGAAGAAAAGGAAAAAATGAAGGGTGCTGAAGAAATGCTGAGGATGATG
ATGATTAAGGAGAACGTTTCATATTTGCATCAAAATCATCAATATGATCATCAAACAACG
ATGGGGTTTTCGCCGTCGGGTTCAAGTTCTTCGTTTTCTGGTACTGGGTTTGGTTTATAT
GGTGATGATTCAGTGGATTCTCGGAATGTATTTGATCATCAGAATATTAATCAAGGAGAA
GGAGGAGTAGTTGATATTACTAATACTACTTCTGGTTGGTCTAACATGCTTTTTCACGAA
CAGAATTTTGATAACCATGTTGACATAGGTGATCTGTCTAAGAGATTTAATTATGGGGTG
AACATCAATGCAACACGAAATTTTGGTCATGATTTTTGTGATTTTCTAAAGTCAGGAGAA
TTATTAGGTGGACAGAAAAATTATTTGTATGATTCAATGGGGTCTTTTTGTAGTATTAAC
AAACTTCCTGTTAATCCTCTGTCCAATGACCTCTGTTTTCAAAAAGAGCAAATTGATTAT
ACTAACTTGTGTAACATGAATAGGCCTAGTAGTAATGTGAGTCTTGGATACTCAGAGCAG
TGTGGATTTAATGATGTTGGTGTTGATAGTAGTTTGTTTAGTTCATTGCATGGCATAAAC
CCAAGCAGGATGGGATTAAATTCAGAATGTGATTGTTCCATTTTAAAGCAGCAAAGGGCT
AAATCAATACCTACTACTAACATAGTGAATCACCCTCTTTCCCCATTGCCATATTCAAGA
AGCCATGAGAGTGAAGATAGCTTCATTATTCAAGGGGAATGTTTAAAATATGCTTCTGAA
CAGAGAAGTTTAAAGGGTCACAAGAAAAAATCGCGGAATGAGATAAAAATGGAAAGGTTG
CAAGAGAAGAAACCAGCAAGAAATAGCTTATTGCATAATGGTTTAGGGGACACAGAATTC
CAAGTAAGAGGAGTTAGTAAAAATGGTTTGGCCTCAAGGGATGATGCTAGTCTTACGCGT
TCGGAACCAAACTATGTGTATTTGGCAGCTAAAGATCAGCTGGGGTGTAGGTATTTACAG
AGGATATTTGATGAAGGGACCTCAGAAGATGTTCAGATAATATTCAATGGCATCATTCAT
AATATCTTTGAGCTAATGAAGGATCCATTCGGGAACTATCTCGTGCAGAAATTATTGACT
GTTTGTAGTGATGAGCAAAGAATGCAGTTTGTGCTTATGGTGACTGATAATCCAGGAGAG
CTTGTGAAAACATCCAAGACAACGCACGGGACCCGTGTTGTGCAAAAGTTAATTGAGACA
ATGAAGACCAGGCTGGAAATTTCATTAGCTATAAGGGCACTTCAACCTGGTATTCTTAAT
CTCATGATGGATGTAAATGGAAATCATGTGGTTCAGCGTTGCTTGCATTGTTTAAGCAAG
GATCATAACAAGCTTATTTTTGATGTTGCGGCTAAACATTGTATTGATATTGCAACACAT
CGTTATGGATGCTGTGTGCTGAACAAATGCATCACTTATTCAACTGGGAAGCAGCGCGAG
AAGTTGCTTGTTGGGATTTGTTCTAATGGGCTTAAGCTTGCTCAAGATCCTTTTGGGAAT
TATGTTGTTCAATTCATAATAGAGTTAAATATAGCCTCTGCTGCAGCCATGTTGCTCTCT
CAGTTTGATGGCCATTATGTATACCTCTCAAGGCAAAAGTTTGGCAGTCATGTTGTTGAA
AAGTTCCTAAAATGTGTTGAAGAAAGCAGGTCGAGAATCATCAATGAGTTAGTCTCAGAG
CCTCATTTTGATCAGTTGCTGCAAGATCCTTTTGCTAACTATGTGATTCAGTCTGCACTT
GGCGTTACTAAGGGATCCGTTCGAGCTTTGCTGCTTCAAGCTGTGAGGCCTCACATGCTT
CTCCTGCGCACGAGTCCATACTGCAAGAAGATCTTCTCTCGGCGACTATTAAAAAAGTAA

Peptide Sequence

PEP ID

XP_016511510.1
PEP Infomation

PREDICTED: mRNA-binding protein PUF3-like [Nicotiana tabacum]
Sequence

MYRGEEKEKMKGAEEMLRMMMIKENVSYLHQNHQYDHQTTMGFSPSGSSSSFSGTGFGLY
GDDSVDSRNVFDHQNINQGEGGVVDITNTTSGWSNMLFHEQNFDNHVDIGDLSKRFNYGV
NINATRNFGHDFCDFLKSGELLGGQKNYLYDSMGSFCSINKLPVNPLSNDLCFQKEQIDY
TNLCNMNRPSSNVSLGYSEQCGFNDVGVDSSLFSSLHGINPSRMGLNSECDCSILKQQRA
KSIPTTNIVNHPLSPLPYSRSHESEDSFIIQGECLKYASEQRSLKGHKKKSRNEIKMERL
QEKKPARNSLLHNGLGDTEFQVRGVSKNGLASRDDASLTRSEPNYVYLAAKDQLGCRYLQ
RIFDEGTSEDVQIIFNGIIHNIFELMKDPFGNYLVQKLLTVCSDEQRMQFVLMVTDNPGE
LVKTSKTTHGTRVVQKLIETMKTRLEISLAIRALQPGILNLMMDVNGNHVVQRCLHCLSK
DHNKLIFDVAAKHCIDIATHRYGCCVLNKCITYSTGKQREKLLVGICSNGLKLAQDPFGN
YVVQFIIELNIASAAAMLLSQFDGHYVYLSRQKFGSHVVEKFLKCVEESRSRIINELVSE
PHFDQLLQDPFANYVIQSALGVTKGSVRALLLQAVRPHMLLLRTSPYCKKIFSRRLLKK

Transcript Sequence

Gene sequence data has not been registered.